Organisms
Here you can find information, and downloads for these organisms:
- Summary of Currently Available Reconstructions:
A table of currently available genome-scale metabolic reconstructions and their properties. Please send it to us if you would like to add your work to this table.
Current News:
- E. coli, H. pylori, S. aureus, S. cerevisiae, and H. sapiens may now be exported and browsed at the BiGG database. Note: In a few reconstructions, author specified sinks are not present. Please see reconstruction publication for details.
- SBML (Systems Biology Markup Language, sbml.org, level 2 version 1) versions of the in silico reconstructions are now available on each organism page. The script to generate these reconstructions is here.
Downloads
If you would like access to download the in silico organisms hosted on this site, please follow the directions at the BiGG database. Passwords will be provided both for BiGG and In Silico Organisms.
Once you have logged in, there will be a drop-down tab on In Silico Organisms for access.
