- A software package running in the MATLAB environment which allows for quantitative prediction of cellular behavior using a constraint-based approach.
Becker, S. et al., "Quantitative prediction of cellular metabolism with constraint-based models: The COBRA Toolbox", Nat. Protoc 2, 727-738 (2007).
- A Biochemical Genetic and Genomic Database of large scale metabolic reconstructions. This is the easiest way to export and browse all reconstructions. - BMC Bioinformatics (in preparation).
SBML generator - SimPheny output specific
(A perl program that converts SimPheny output to SBML level 2, version 1)
Other material
For organism-related downloads, such as metabolic network properties please click here.
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